Detailed information of Aala_g2362.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAF2352848.1, hypothetical protein FHG87_016390 [Trinorchestia longiramus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P14381Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1
Q6P418Receptor expression-enhancing protein 3-A OS=Xenopus laevis OX=8355 GN=reep3-a PE=2 SV=1
Q5HZP8Receptor expression-enhancing protein 3-B OS=Xenopus laevis OX=8355 GN=reep3-b PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01602Adaptin_NAdaptin N terminal regionRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000515DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR017106FamilyCoatomer gamma subunitInterproscan
IPR002553DomainClathrin/coatomer adaptor, adaptin-like, N-terminalInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10261COATOMER SUBUNIT GAMMAInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005793Cellular Componentendoplasmic reticulum-Golgi intermediate compartmentInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0006891Biological Processintra-Golgi vesicle-mediated transportInterproscan
GO:0009306Biological Processprotein secretionInterproscan
GO:0030126Cellular ComponentCOPI vesicle coatInterproscan
GO:0072384Biological Processorganelle transport along microtubuleInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030117Cellular Componentmembrane coatInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

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