Detailed information of Aala_g2381.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCP3667059.1, DDE-type integrase/transposase/recombinase [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P04146Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
Q94HW2Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan
PF03917GSH_synth_ATPEukaryotic glutathione synthase, ATP binding domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR011759DomainCytochrome C oxidase subunit II, transmembrane domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR051876FamilyOuter dynein arm-docking/Coiled-coil domain-containing proteinInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR011043Homologous_superfamilyGalactose oxidase/kelch, beta-propellerInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR014049Homologous_superfamilyGlutathione synthase, N-terminal, eukaryoticInterproscan
IPR005615FamilyGlutathione synthaseInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45749-Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21694UNCHARACTERIZEDInterproscan
PTHR45632LD33804PInterproscan
PTHR11130GLUTATHIONE SYNTHETASEInterproscan
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022900Biological Processelectron transport chainInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004363Molecular Functionglutathione synthase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006750Biological Processglutathione biosynthetic processInterproscan
GO:0043295Molecular Functionglutathione bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10457KLHL20, KLEIP; kelch-like protein 20-Ubiquitin systemko04121deepkoala

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