Detailed information of Aala_g2384.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCG8078922.1, hypothetical protein [Candidatus Thiodiazotropha taylori]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
Q8BUZ3Tigger transposable element-derived protein 4 OS=Mus musculus OX=10090 GN=Tigd4 PE=2 SV=1
Q8IY51Tigger transposable element-derived protein 4 OS=Homo sapiens OX=9606 GN=TIGD4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04218CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF20049DUF6451Domain of unknown function (DUF6451)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR014010DomainREJ domainInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR045609DomainDomain of unknown function DUF6451Interproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR19303TRANSPOSONInterproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46888ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02341holB; DNA polymerase III subunit delta'EC:2.7.7.7
DNA repair and recombination proteinsko03400deepkoala

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