Gene detail

Detailed information of Aala_g2385.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_039259582.1, SCAN domain-containing protein 3-like [Styela clava]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q7LHG5	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2
Q99315	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3
P04323	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00077	RVP	Retroviral aspartyl protease	Domain	Interproscan
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR001995	Domain	Peptidase A2A, retrovirus, catalytic	Interproscan
IPR018061	Domain	Retropepsins	Interproscan
IPR034132	Domain	Retropepsin Saci-like domain	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR040016	Family	Exportin-6	Interproscan
IPR002052	Conserved_site	DNA methylase, N-6 adenine-specific, conserved site	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR051137	Family	Serine/threonine-protein phosphatase 4 regulatory subunit 3	Interproscan
IPR011527	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR026791	Family	Dedicator of cytokinesis	Interproscan
IPR052614	Family	Cilia-Flagella-Associated Protein 65	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR21452	EXPORTIN-6	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR23318	ATP SYNTHASE GAMMA-RELATED	Interproscan
PTHR47018	CXC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR23317	DEDICATOR OF CYTOKINESIS DOCK	Interproscan
PTHR46127	CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 65	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0005049	Molecular Function	nuclear export signal receptor activity	Interproscan
GO:0006611	Biological Process	protein export from nucleus	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0032259	Biological Process	methylation	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0006974	Biological Process	DNA damage response	Interproscan
GO:0030289	Cellular Component	protein phosphatase 4 complex	Interproscan
GO:0072542	Molecular Function	protein phosphatase activator activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0043547	Biological Process	positive regulation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24642	ZBED5_7_8_9, BUSTER; zinc finger BED domain-containing protein 5/7/8/9	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala