Detailed information of Aala_g2386.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_039259580.1, SCAN domain-containing protein 3-like [Styela clava]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P0CT41Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1
P0CT34Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1
P0CT35Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12799LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF00431CUBCUB domainDomainInterproscan
PF03479PCCPlants and Prokaryotes Conserved (PCC) domainDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF13602ADH_zinc_N_2Zinc-binding dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR025875RepeatLeucine rich repeat 4Interproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR009017Homologous_superfamilyGreen fluorescent proteinInterproscan
IPR024731DomainEGF domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR000859DomainCUB domainInterproscan
IPR050841FamilyDevelopmental metalloproteases and endocytic receptorsInterproscan
IPR005175DomainPPC domainInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR24251OVOCHYMASE-RELATEDInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR34988PROTEIN, PUTATIVE-RELATEDInterproscan
PTHR47510REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR48106QUINONE OXIDOREDUCTASE PIG3-RELATEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR35846PROTEIN CBG05131Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0016651Molecular Functionoxidoreductase activity, acting on NAD(P)HInterproscan
GO:0070402Molecular FunctionNADPH bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18646ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D-Messenger RNA biogenesisko03019deepkoala

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