Detailed information of Aala_g2401.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_047496558.1, uncharacterized protein LOC125044150 [Penaeus chinensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2
Q8C115Pleckstrin homology domain-containing family H member 2 OS=Mus musculus OX=10090 GN=Plekhh2 PE=1 SV=3
Q8IVE3Pleckstrin homology domain-containing family H member 2 OS=Homo sapiens OX=9606 GN=PLEKHH2 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyHTH
Ubiquitin FamilyULD|UBL|ATG8

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF03732Retrotrans_gagRetrotransposon gag protein FamilyInterproscan
PF05225HTH_psqhelix-turn-helix, Psq domainDomainInterproscan
PF02991ATG8Autophagy protein Atg8 ubiquitin likeDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01347Vitellogenin_NLipoprotein amino terminal regionRepeatInterproscan
PF09172Vit_open_b-shtVitellinogen, open beta-sheetDomainInterproscan
PF20667Sec10_NExocyst complex component Sec10, N-terminalRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR005162DomainRetrotransposon gag domainInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR027731FamilyMicrotubule-associated protein 1A/1B light chain 3CInterproscan
IPR004241FamilyAutophagy protein Atg8 ubiquitin-likeInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR011030Homologous_superfamilyLipovitellin-phosvitin complex, superhelical domainInterproscan
IPR015817Homologous_superfamilyVitellinogen, open beta-sheet, subdomain 1Interproscan
IPR015819Homologous_superfamilyLipid transport protein, beta-sheet shellInterproscan
IPR001747DomainVitellogenin, N-terminalInterproscan
IPR050733FamilyVitellogenin/ApolipophorinInterproscan
IPR015255DomainVitellinogen, open beta-sheetInterproscan
IPR048625DomainExocyst complex component Sec10, N-terminalInterproscan
IPR009976FamilyExocyst complex component Sec10-likeInterproscan
IPR006580DomainZinc finger, TTF-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR10969MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23345VITELLOGENIN-RELATEDInterproscan
PTHR12100SEC10Interproscan
PTHR22903PLEKHH PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0000045Biological Processautophagosome assemblyInterproscan
GO:0000421Cellular Componentautophagosome membraneInterproscan
GO:0000422Biological Processautophagy of mitochondrionInterproscan
GO:0005776Cellular ComponentautophagosomeInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006995Biological Processcellular response to nitrogen starvationInterproscan
GO:0016236Biological ProcessmacroautophagyInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan
GO:0097352Biological Processautophagosome maturationInterproscan
GO:0005319Molecular Functionlipid transporter activityInterproscan
GO:0006869Biological Processlipid transportInterproscan
GO:0000145Cellular ComponentexocystInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006887Biological ProcessexocytosisInterproscan
GO:0006893Biological ProcessGolgi to plasma membrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10435MAP1LC; microtubule-associated protein 1 light chain-Ubiquitin systemko04121deepkoala
Mitochondrial biogenesisko03029deepkoala
Cytoskeleton proteinsko04812deepkoala

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