Genomic Location: :...
NR annotation: MCT5353383.1, reverse transcriptase family protein [Pseudomonas aeruginosa]
| CDS | ||||
| Transcript |
| Protein |
| Uniprot term | Description |
|---|---|
| P14350 | Pro-Pol polyprotein OS=Human spumaretrovirus OX=11963 GN=pol PE=1 SV=2 |
| P27401 | Pro-Pol polyprotein OS=Simian foamy virus type 3 (strain LK3) OX=11644 GN=pol PE=3 SV=2 |
| Q87040 | Pro-Pol polyprotein OS=Simian foamy virus (isolate chimpanzee) OX=298339 GN=pol PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF01048 | PNP_UDP_1 | Phosphorylase superfamily | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR050951 | Family | Retrovirus-related Pol polyprotein | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR036875 | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR010044 | Family | Methylthioadenosine phosphorylase (MTAP) | Interproscan |
| IPR000845 | Domain | Nucleoside phosphorylase domain | Interproscan |
| IPR035994 | Homologous_superfamily | Nucleoside phosphorylase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR37984 | PROTEIN CBG26694 | Interproscan |
| PTHR42679 | S-METHYL-5'-THIOADENOSINE PHOSPHORYLASE | Interproscan |
| PTHR47027 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0017061 | Molecular Function | S-methyl-5-thioadenosine phosphorylase activity | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0019509 | Biological Process | L-methionine salvage from methylthioadenosine | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0009116 | Biological Process | nucleoside metabolic process | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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