Detailed information of Aala_g2422.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_015775331.1, PREDICTED: tctex1 domain-containing protein 1-B-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F1QMY1Dynein light chain Tctex-type protein 2B OS=Danio rerio OX=7955 GN=dynlt2b PE=3 SV=1
Q0IIG7Ras-related protein Rab-5A OS=Bos taurus OX=9913 GN=RAB5A PE=1 SV=1
P18066Ras-related protein Rab-5A OS=Canis lupus familiaris OX=9615 GN=RAB5A PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF03645Tctex-1Tctex-1 familyFamilyInterproscan
PF11878DOCK_C-D_NDedicator of cytokinesis C/D, N terminalDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF16474KINDKinase non-catalytic C-lobe domainDomainInterproscan
PF00071RasRas familyDomainInterproscan
PF00209SNFSodium:neurotransmitter symporter familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR038586Homologous_superfamilyTctex-1-like superfamilyInterproscan
IPR005334FamilyDynein light chain Tctex-1 likeInterproscan
IPR021816DomainDedicator of cytokinesis C/D, N-terminalInterproscan
IPR050972FamilySerine-aspartate repeat-containing proteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR011019DomainKIND domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR029901FamilyProtein SpireInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR026737FamilyGolgin subfamily A member 6-likeInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR037272Homologous_superfamilySodium:neurotransmitter symporter superfamilyInterproscan
IPR000175FamilySodium:neurotransmitter symporterInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34072ENZYMATIC POLYPROTEIN-RELATEDInterproscan
PTHR21255T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAINInterproscan
PTHR34403TOL-PAL SYSTEM PROTEIN TOLAInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR21345SPIREInterproscan
PTHR23143TRICHOHYALIN-RELATEDInterproscan
PTHR47978-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005868Cellular Componentcytoplasmic dynein complexInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005938Cellular Componentcell cortexInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030041Biological Processactin filament polymerizationInterproscan
GO:0030659Cellular Componentcytoplasmic vesicle membraneInterproscan
GO:0036089Biological Processcleavage furrow formationInterproscan
GO:0040038Biological Processpolar body extrusion after meiotic divisionsInterproscan
GO:0045010Biological Processactin nucleationInterproscan
GO:0046907Biological Processintracellular transportInterproscan
GO:0048193Biological ProcessGolgi vesicle transportInterproscan
GO:0051295Biological Processestablishment of meiotic spindle localizationInterproscan
GO:0051639Biological Processactin filament network formationInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02098SPIR; spire-Dorso-ventral axis formationko04320deepkoala

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