Detailed information of Aala_g2435.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_046846580.1, ATP-binding cassette sub-family F member 2-like [Xenia sp. Carnegie-2017]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9FJH6ABC transporter F family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCF1 PE=2 SV=1
Q9UG63ATP-binding cassette sub-family F member 2 OS=Homo sapiens OX=9606 GN=ABCF2 PE=1 SV=2
Q99LE6ATP-binding cassette sub-family F member 2 OS=Mus musculus OX=10090 GN=Abcf2 PE=1 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00233PDEase_I3'5'-cyclic nucleotide phosphodiesteraseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR050688FamilyZinc finger and ubiquitin peptidase domain-containing proteinInterproscan
IPR004210DomainBESS motifInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR002073Domain3'5'-cyclic nucleotide phosphodiesterase, catalytic domainInterproscan
IPR003607DomainHD/PDEase domainInterproscan
IPR023088Family3'5'-cyclic nucleotide phosphodiesteraseInterproscan
IPR023174Conserved_site3'5'-cyclic nucleotide phosphodiesterase, conserved siteInterproscan
IPR036971Homologous_superfamily3'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamilyInterproscan
IPR050611FamilyATP-binding cassette sub-family F member, EF3 subfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24403ZINC FINGER PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR11347CYCLIC NUCLEOTIDE PHOSPHODIESTERASEInterproscan
PTHR19211ATP-BINDING TRANSPORT PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004114Molecular Function3',5'-cyclic-nucleotide phosphodiesterase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0008081Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

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