Detailed information of Aala_g2440.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_002162252.2, G1/S-specific cyclin-E1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O15995G1/S-specific cyclin-E OS=Hemicentrotus pulcherrimus OX=7650 GN=CYCE PE=2 SV=1
P39949G1/S-specific cyclin-E1 OS=Rattus norvegicus OX=10116 GN=Ccne1 PE=1 SV=2
Q61457G1/S-specific cyclin-E1 OS=Mus musculus OX=10090 GN=Ccne1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02149KA1Kinase associated domain 1DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00134Cyclin_NCyclin, N-terminal domainDomainInterproscan
PF02984Cyclin_CCyclin, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR028375Homologous_superfamilyKA1 domain/Ssp2, C-terminalInterproscan
IPR001772DomainKinase associated domain 1 (KA1)Interproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR006671DomainCyclin, N-terminalInterproscan
IPR004367DomainCyclin, C-terminal domainInterproscan
IPR036915Homologous_superfamilyCyclin-like superfamilyInterproscan
IPR013763DomainCyclin-like domainInterproscan
IPR048258Conserved_siteCyclins, cyclin-boxInterproscan
IPR039361FamilyCyclinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37162HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR10177CYCLINSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0000079Biological Processregulation of cyclin-dependent protein serine/threonine kinase activityInterproscan
GO:0000082Biological ProcessG1/S transition of mitotic cell cycleInterproscan
GO:0000307Cellular Componentcyclin-dependent protein kinase holoenzyme complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016538Molecular Functioncyclin-dependent protein serine/threonine kinase regulator activityInterproscan
GO:0044772Biological Processmitotic cell cycle phase transitionInterproscan
GO:0097134Cellular Componentcyclin E1-CDK2 complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06626CCNE; G1/S-specific cyclin-E1-Chromosome and associated proteinsko03036deepkoala

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