Detailed information of Aala_g2447.t1 in Alatina alata

Genomic Location: :...
NR annotation: GFR86336.1, nuclease harbi1-like protein [Elysia marginata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BUZ3Tigger transposable element-derived protein 4 OS=Mus musculus OX=10090 GN=Tigd4 PE=2 SV=1
Q8IY51Tigger transposable element-derived protein 4 OS=Homo sapiens OX=9606 GN=TIGD4 PE=1 SV=2
Q17RP2Tigger transposable element-derived protein 6 OS=Homo sapiens OX=9606 GN=TIGD6 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF13850ERGIC_NEndoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)DomainInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF04218CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR052603FamilyEF-hand calcium-binding domain-containing protein 6Interproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR045888FamilyEndoplasmic reticulum vesicle transporterInterproscan
IPR039542DomainEndoplasmic reticulum vesicle transporter, N-terminalInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR20875EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATEDInterproscan
PTHR10984ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEINInterproscan
PTHR47236GENE, 32742-RELATED-RELATEDInterproscan
PTHR19303TRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0006890Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030134Cellular ComponentCOPII-coated ER to Golgi transport vesicleInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

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