Detailed information of Aala_g2451.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCH2405858.1, hypothetical protein [Nitrosopumilus sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8TB22Spermatogenesis-associated protein 20 OS=Homo sapiens OX=9606 GN=SPATA20 PE=1 SV=3
Q80YT5Spermatogenesis-associated protein 20 OS=Mus musculus OX=10090 GN=Spata20 PE=1 SV=1
Q6T393Spermatogenesis-associated protein 20 OS=Rattus norvegicus OX=10116 GN=Spata20 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00152tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF01423LSMLSM domain DomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF00135COesteraseCarboxylesterase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004364DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR001163DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR033871DomainSm-like protein LSm5Interproscan
IPR047575DomainSm domainInterproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR052638FamilyPiggyBac transposable element-derivedInterproscan
IPR008928Homologous_superfamilySix-hairpin glycosidase superfamilyInterproscan
IPR012341Homologous_superfamilySix-hairpin glycosidase-like superfamilyInterproscan
IPR024705FamilySpermatogenesis-associated protein 20Interproscan
IPR002018DomainCarboxylesterase, type BInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22594ASPARTYL/LYSYL-TRNA SYNTHETASEInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR34615PX DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR20971U6 SNRNA-ASSOCIATED PROTEINInterproscan
PTHR47055DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR42899SPERMATOGENESIS-ASSOCIATED PROTEIN 20Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004816Molecular Functionasparagine-tRNA ligase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006421Biological Processasparaginyl-tRNA aminoacylationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005688Cellular ComponentU6 snRNPInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:1990726Cellular ComponentLsm1-7-Pat1 complexInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26403CIAO2, CIA2, FAM96; cytosolic iron-sulfur assembly component 2-Spliceosomeko03041deepkoala
Signaling proteins-deepkoala

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