Gene detail

Detailed information of Aala_g2470.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4002329.1, glutamate synthase 1 [NADH], chloroplastic-like, partial [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q9C102	Glutamate synthase [NADH] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=glt1 PE=1 SV=1
Q03460	Glutamate synthase [NADH], amyloplastic OS=Medicago sativa OX=3879 PE=1 SV=1
Q0DG35	Glutamate synthase 2 [NADH], chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0555600 PE=2 SV=2

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan
PF00310	GATase_2	Glutamine amidotransferases class-II	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR052294	Family	Visual system homeobox transcriptional regulators	Interproscan
IPR008936	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR017932	Domain	Glutamine amidotransferase type 2 domain	Interproscan
IPR050711	Family	Electron transfer and nitrogen metabolism enzyme	Interproscan
IPR029055	Homologous_superfamily	Nucleophile aminohydrolases, N-terminal	Interproscan
IPR049680	Family	Solute carrier family 49-like	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46704	CXC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR47773	SI:DKEY-9I5.2-RELATED	Interproscan
PTHR46892	VISUAL SYSTEM HOMEOBOX 2	Interproscan
PTHR11938	FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE	Interproscan
PTHR10924	MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:1990837	Molecular Function	sequence-specific double-stranded DNA binding	Interproscan
GO:0006537	Biological Process	glutamate biosynthetic process	Interproscan
GO:0015930	Molecular Function	glutamate synthase activity	Interproscan
GO:0016040	Molecular Function	glutamate synthase (NADH) activity	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0019676	Biological Process	ammonia assimilation cycle	Interproscan
GO:0015232	Molecular Function	heme transmembrane transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0051184	Molecular Function	obsolete cofactor transmembrane transporter activity	Interproscan
GO:0097037	Biological Process	heme export	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17797	COX18; mitochondrial inner membrane protein COX18	-	Transporters	ko02000	deepkoala