Detailed information of Aala_g2477.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH2100953.1, unnamed protein product [Euphydryas editha]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8WVS4Cytoplasmic dynein 2 intermediate chain 1 OS=Homo sapiens OX=9606 GN=DYNC2I1 PE=1 SV=3
Q8C761Cytoplasmic dynein 2 intermediate chain 1 OS=Mus musculus OX=10090 GN=Dync2i1 PE=1 SV=1
Q86X52Chondroitin sulfate synthase 1 OS=Homo sapiens OX=9606 GN=CHSY1 PE=1 SV=3
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05679CHGNChondroitin N-acetylgalactosaminyltransferaseFamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF12874zf-metZinc-finger of C2H2 typeDomainInterproscan
PF20049DUF6451Domain of unknown function (DUF6451)DomainInterproscan
PF02945Endonuclease_7Recombination endonuclease VIIDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR051227FamilyChondroitin sulfate glycosyltransferaseInterproscan
IPR008428FamilyChondroitin N-acetylgalactosaminyltransferaseInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR045609DomainDomain of unknown function DUF6451Interproscan
IPR042505FamilyCytoplasmic dynein 2 intermediate chain 1Interproscan
IPR004211FamilyRecombination endonuclease VIIInterproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR038563Homologous_superfamilyRecombination endonuclease VII superfamilyInterproscan
IPR044925Homologous_superfamilyHis-Me finger superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12369CHONDROITIN SYNTHASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR16022WD REPEAT DOMAIN 60Interproscan
PTHR31511PROTEIN CBG23764Interproscan
PTHR22955RETROTRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008376Molecular Functionacetylgalactosaminyltransferase activityInterproscan
GO:0030206Biological Processchondroitin sulfate biosynthetic processInterproscan
GO:0047238Molecular Functionglucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activityInterproscan
GO:0032580Cellular ComponentGolgi cisterna membraneInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0005868Cellular Componentcytoplasmic dynein complexInterproscan
GO:0042073Biological Processintraciliary transportInterproscan
GO:0045503Molecular Functiondynein light chain bindingInterproscan
GO:0045504Molecular Functiondynein heavy chain bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

TOP