Detailed information of Aala_g2497.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG2455698.1, RHBL1 protein, partial [Polypterus senegalus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P98158Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1
C0HL13Low-density lipoprotein receptor-related protein 2 OS=Sus scrofa OX=9823 GN=LRP2 PE=1 SV=1
A2ARV4Low-density lipoprotein receptor-related protein 2 OS=Mus musculus OX=10090 GN=Lrp2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02867Ribonuc_red_lgCRibonucleotide reductase, barrel domainFamilyInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF03914CBFCBF/Mak21 familyRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000788DomainRibonucleotide reductase large subunit, C-terminalInterproscan
IPR039718FamilyRibonucleoside-diphosphate reductase large subunitInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR050778FamilyCueball/EGF/LRP/NidogenInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR027193FamilyNucleolar complex protein 4Interproscan
IPR005612DomainCCAAT-binding factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11573RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAINInterproscan
PTHR46513VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATEDInterproscan
PTHR33064POL PROTEINInterproscan
PTHR34839CS DOMAIN-CONTAINING PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR12455NUCLEOLAR COMPLEX PROTEIN 4Interproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004748Molecular Functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptorInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005971Cellular Componentribonucleoside-diphosphate reductase complexInterproscan
GO:0009263Biological Processdeoxyribonucleotide biosynthetic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030692Cellular ComponentNoc4p-Nop14p complexInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan

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