Gene detail

Detailed information of Aala_g2498.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_044174604.1, uncharacterized protein LOC122958137 [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q86UV5	Ubiquitin carboxyl-terminal hydrolase 48 OS=Homo sapiens OX=9606 GN=USP48 PE=1 SV=1
A0A0R4IB93	Ubiquitin carboxyl-terminal hydrolase 48 OS=Danio rerio OX=7955 GN=usp48 PE=3 SV=1
Q5ZM45	Ubiquitin carboxyl-terminal hydrolase 48 OS=Gallus gallus OX=9031 GN=USP48 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037493	Family	Exodeoxyribonuclease III-like	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR028889	Domain	Ubiquitin specific protease domain	Interproscan
IPR018200	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46114	APPLE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR43250	EXODEOXYRIBONUCLEASE III	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0008311	Molecular Function	double-stranded DNA 3'-5' DNA exonuclease activity	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00339	nuoJ; NADH-quinone oxidoreductase subunit J	EC:7.1.1.2	Oxidative phosphorylation	ko00190	deepkoala