Detailed information of Aala_g2509.t1 in Alatina alata

Genomic Location: :...
NR annotation: GFO06676.1, endonuclease-reverse transcriptase [Plakobranchus ocellatus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9UR07Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1
P0CT41Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1
P0CT34Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00171AldedhAldehyde dehydrogenase familyFamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00221Lyase_aromaticAromatic amino acid lyaseFamilyInterproscan
PF02791DDTDDT domainFamilyInterproscan
PF00628PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016163Homologous_superfamilyAldehyde dehydrogenase, C-terminalInterproscan
IPR015590DomainAldehyde dehydrogenase domainInterproscan
IPR016161Homologous_superfamilyAldehyde/histidinol dehydrogenaseInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001734FamilySodium/solute symporterInterproscan
IPR001106FamilyAromatic amino acid lyaseInterproscan
IPR008948Homologous_superfamilyL-Aspartase-likeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR038028FamilyNucleosome-remodeling factor subunit BPTFInterproscan
IPR018501DomainDDT domainInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11699ALDEHYDE DEHYDROGENASE-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR48209AGL056WPInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10362HISTIDINE AMMONIA-LYASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR45975NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTFInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0004029Molecular Functionaldehyde dehydrogenase (NAD+) activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0004397Molecular Functionhistidine ammonia-lyase activityInterproscan
GO:0006548Biological ProcessL-histidine catabolic processInterproscan
GO:0016841Molecular Functionammonia-lyase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016589Cellular ComponentNURF complexInterproscan
GO:0035064Molecular Functionmethylated histone bindingInterproscan

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