Gene detail

Detailed information of Aala_g251.t1 in Alatina alata

Genomic Location: :...
NR annotation: PAA94766.1, hypothetical protein BOX15_Mlig000316g1 [Macrostomum lignano]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A0JMF8	Transcription factor RFX3 OS=Danio rerio OX=7955 GN=rfx3 PE=2 SV=1
B2GV50	DNA-binding protein RFX2 OS=Rattus norvegicus OX=10116 GN=Rfx2 PE=1 SV=1
Q32NR3	DNA-binding protein RFX2 OS=Xenopus laevis OX=8355 GN=rfx2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00201	UDPGT	UDP-glucoronosyl and UDP-glucosyl transferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR027124	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR039779	Family	RFX-like DNA-binding protein	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR002156	Domain	Ribonuclease H domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR002213	Family	UDP-glucuronosyl/UDP-glucosyltransferase	Interproscan
IPR050271	Family	UDP-glycosyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23227	BUCENTAUR RELATED	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR12619	RFX TRANSCRIPTION FACTOR FAMILY	Interproscan
PTHR22538	UNCHARACTERIZED	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR48043	EG:EG0003.4 PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0008194	Molecular Function	UDP-glycosyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04439	ARRB; beta-arrestin	-	Membrane trafficking	ko04131	deepkoala