Gene detail

Detailed information of Aala_g2521.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCP3851270.1, hypothetical protein [Gammaproteobacteria bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q29041	Ficolin-2 OS=Sus scrofa OX=9823 GN=FCN2 PE=1 SV=1
P19477	Fibrinogen-like protein A OS=Apostichopus parvimensis OX=1902835 PE=2 SV=1
Q15485	Ficolin-2 OS=Homo sapiens OX=9606 GN=FCN2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13489	Methyltransf_23	Methyltransferase domain	Domain	Interproscan
PF13966	zf-RVT	zinc-binding in reverse transcriptase	Domain	Interproscan
PF00147	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR026960	Domain	Reverse transcriptase zinc-binding domain	Interproscan
IPR051944	Family	BEACH domain-containing protein	Interproscan
IPR050373	Family	Fibrinogen C-terminal domain-containing protein	Interproscan
IPR014716	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR35450	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR46108	BLUE CHEESE	Interproscan
PTHR19143	FIBRINOGEN/TENASCIN/ANGIOPOEITIN	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18666	ASCC1; activating signal cointegrator complex subunit 1	-	Transcription	-	deepkoala