Detailed information of Aala_g2524.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_025080867.1, mothers against decapentaplegic homolog 6-like [Pomacea canaliculata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O35182Mothers against decapentaplegic homolog 6 OS=Mus musculus OX=10090 GN=Smad6 PE=1 SV=1
O43541Mothers against decapentaplegic homolog 6 OS=Homo sapiens OX=9606 GN=SMAD6 PE=1 SV=2
O35253Mothers against decapentaplegic homolog 7 OS=Mus musculus OX=10090 GN=Smad7 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyMH1
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF16211Histone_H2A_CC-terminus of histone H2AFamilyInterproscan
PF03165MH1MH1 domainDomainInterproscan
PF00091TubulinTubulin/FtsZ family, GTPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR037493FamilyExodeoxyribonuclease III-likeInterproscan
IPR000569DomainHECT domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR050409FamilyE3 ubiquitin-protein ligaseInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR002119FamilyHistone H2AInterproscan
IPR032458Conserved_siteHistone H2A conserved siteInterproscan
IPR032454DomainHistone H2A, C-terminal domainInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR013019DomainMAD homology, MH1Interproscan
IPR003619DomainMAD homology 1, Dwarfin-typeInterproscan
IPR036578Homologous_superfamilySMAD MH1 domain superfamilyInterproscan
IPR013790FamilyDwarfinInterproscan
IPR003008DomainTubulin/FtsZ, GTPase domainInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR000217FamilyTubulinInterproscan
IPR002452FamilyAlpha tubulinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR43250EXODEOXYRIBONUCLEASE IIIInterproscan
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11254HECT DOMAIN UBIQUITIN-PROTEIN LIGASEInterproscan
PTHR23430HISTONE H2AInterproscan
PTHR13703SMADInterproscan
PTHR36527OS01G0282866 PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008311Molecular Functiondouble-stranded DNA 3'-5' DNA exonuclease activityInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0043066Biological Processnegative regulation of apoptotic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0006342Biological Processheterochromatin formationInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007179Biological Processtransforming growth factor beta receptor signaling pathwayInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0060395Biological ProcessSMAD protein signal transductionInterproscan
GO:0070411Molecular FunctionI-SMAD bindingInterproscan
GO:0071144Cellular Componentheteromeric SMAD protein complexInterproscan
GO:0140416Molecular Functiontranscription regulator inhibitor activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11251H2A; histone H2A-Exosomeko04147deepkoala

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