Gene detail

Detailed information of Aala_g2525.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_031570952.1, 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A4QN59	2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Danio rerio OX=7955 GN=dph2 PE=2 SV=1
A7SKJ3	2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Nematostella vectensis OX=45351 GN=dph2 PE=3 SV=1
B0G132	2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Dictyostelium discoideum OX=44689 GN=dph2 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF13359	DDE_Tnp_4	DDE superfamily endonuclease	Domain	Interproscan
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF01498	HTH_Tnp_Tc3_2	Transposase	Family	Interproscan
PF13358	DDE_3	DDE superfamily endonuclease	Domain	Interproscan
PF13936	HTH_38	Helix-turn-helix domain	Domain	Interproscan
PF01866	Diphthamide_syn	Putative diphthamide synthesis protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR051681	Family	Serine/Threonine Kinases and Pseudokinases	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR027806	Domain	Harbinger transposase-derived nuclease domain	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR002492	Domain	Transposase, Tc1-like	Interproscan
IPR052338	Family	Transposase_5	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR038717	Domain	Tc1-like transposase, DDE domain	Interproscan
IPR025246	Domain	Transposase IS30-like HTH domain	Interproscan
IPR047655	Family	Transposase IS630-like	Interproscan
IPR016435	Family	Diphthamide synthesis DPH1/DPH2	Interproscan
IPR042265	Homologous_superfamily	Diphthamide synthesis DPH1/DPH2, domain 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	Interproscan
PTHR44329	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	Interproscan
PTHR46114	APPLE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR46954	C2H2-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR34615	PX DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR23022	TRANSPOSABLE ELEMENT-RELATED	Interproscan
PTHR10762	DIPHTHAMIDE BIOSYNTHESIS PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006313	Biological Process	DNA transposition	Interproscan
GO:0017183	Biological Process	protein histidyl modification to diphthamide	Interproscan
GO:0090560	Molecular Function	2-(3-amino-3-carboxypropyl)histidine synthase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22257	SPATA18; mitochondria-eating protein	-	Membrane trafficking	ko04131	deepkoala