Gene detail

Detailed information of Aala_g2540.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_046863266.1, uncharacterized protein LOC124457010 [Xenia sp. Carnegie-2017]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9D964	Glycine amidinotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Gatm PE=1 SV=1
P50442	Glycine amidinotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gatm PE=1 SV=1
Q2HJ74	Glycine amidinotransferase, mitochondrial OS=Bos taurus OX=9913 GN=GATM PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14775	NYD-SP28_assoc	Sperm tail C-terminal domain	Domain	Interproscan
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF03184	DDE_1	DDE superfamily endonuclease	Family	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR033195	Family	Glycine/inosamine-phosphate amidinotransferase	Interproscan
IPR039750	Family	Dynein regulatory complex protein	Interproscan
IPR029440	Domain	Dynein regulatory complex protein 1, C-terminal	Interproscan
IPR053272	Family	Serine/threonine/tyrosine-interacting-like protein	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR026082	Family	ABC transporter A	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR050863	Family	Centromere and Transposable Element-Derived Protein	Interproscan
IPR004875	Domain	DDE superfamily endonuclease domain	Interproscan
IPR027124	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR10488	GLYCINE AMIDINOTRANSFERASE, MITOCHONDRIAL	Interproscan
PTHR21625	NYD-SP28 PROTEIN	Interproscan
PTHR46659	SERINE/THREONINE/TYROSINE-INTERACTING-LIKE PROTEIN 1	Interproscan
PTHR19229	ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA	Interproscan
PTHR19303	TRANSPOSON	Interproscan
PTHR23227	BUCENTAUR RELATED	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0015067	Molecular Function	amidinotransferase activity	Interproscan
GO:0003352	Biological Process	regulation of cilium movement	Interproscan
GO:0005858	Cellular Component	axonemal dynein complex	Interproscan
GO:0005930	Cellular Component	axoneme	Interproscan
GO:0060285	Biological Process	cilium-dependent cell motility	Interproscan
GO:0070286	Biological Process	axonemal dynein complex assembly	Interproscan
GO:0001691	Molecular Function	pseudophosphatase activity	Interproscan
GO:0004864	Molecular Function	protein phosphatase inhibitor activity	Interproscan
GO:0019903	Molecular Function	protein phosphatase binding	Interproscan
GO:0062030	Biological Process	negative regulation of stress granule assembly	Interproscan
GO:2001244	Biological Process	positive regulation of intrinsic apoptotic signaling pathway	Interproscan
GO:0005319	Molecular Function	lipid transporter activity	Interproscan
GO:0006869	Biological Process	lipid transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0033700	Biological Process	phospholipid efflux	Interproscan
GO:0042626	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0090554	Molecular Function	phosphatidylcholine floppase activity	Interproscan
GO:0090556	Molecular Function	phosphatidylserine floppase activity	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01990	ABC-2.A; ABC-2 type transport system ATP-binding protein	-	Transporters	ko02000	deepkoala