Detailed information of Aala_g2549.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_019849395.1, PREDICTED: major vault protein-like [Amphimedon queenslandica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9DGM7Major vault protein (Fragment) OS=Ictalurus punctatus OX=7998 GN=mvp PE=2 SV=2
Q6P3L0Major vault protein OS=Danio rerio OX=7955 GN=mvp PE=2 SV=1
P54659Major vault protein beta OS=Dictyostelium discoideum OX=44689 GN=mvpB PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF09607BrkDBDBrinker DNA-binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR018586DomainBrinker DNA-binding domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR039059FamilyMajor vault proteinInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR002017RepeatSpectrin repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR14165MAJOR VAULT PROTEINInterproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02420fliQ; flagellar biosynthesis protein FliQ-Bacterial motility proteinsko02035deepkoala

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