Gene detail

Detailed information of Aala_g255.t1 in Alatina alata

Genomic Location: :...
NR annotation: PNF28816.1, hypothetical protein B7P43_G05701 [Cryptotermes secundus]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q712K3	Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens OX=9606 GN=UBE2R2 PE=1 SV=1
Q6ZWZ2	Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus OX=10090 GN=Ube2r2 PE=1 SV=1
Q29503	Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus OX=9986 GN=UBE2R2 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	T-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan
PF13961	DUF4219	Domain of unknown function (DUF4219)	Domain	Interproscan
PF00907	T-box	T-box	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF04937	DUF659	Protein of unknown function (DUF 659)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025314	Domain	Domain of unknown function DUF4219	Interproscan
IPR008967	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan
IPR001699	Family	T-box transcription factor	Interproscan
IPR046360	Domain	T-box transcription factor, DNA-binding domain	Interproscan
IPR036960	Homologous_superfamily	T-box superfamily	Interproscan
IPR018186	Conserved_site	Transcription factor, T-box, conserved site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR007021	Domain	Domain of unknown function DUF659	Interproscan
IPR016135	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR000608	Domain	Ubiquitin-conjugating enzyme E2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35317	OS04G0629600 PROTEIN	Interproscan
PTHR11267	T-BOX PROTEIN-RELATED	Interproscan
PTHR46670	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR46888	ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0001708	Biological Process	cell fate specification	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0045893	Biological Process	positive regulation of DNA-templated transcription	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan