Detailed information of Aala_g2556.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB3988037.1, Retrovirus-related Pol poly from transposon 412 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2YDE4Proteasome subunit alpha type-6 OS=Bos taurus OX=9913 GN=PSMA6 PE=1 SV=1
P60900Proteasome subunit alpha type-6 OS=Homo sapiens OX=9606 GN=PSMA6 PE=1 SV=1
P60901Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00227ProteasomeProteasome subunitDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF05585DUF1758Putative peptidase (DUF1758)FamilyInterproscan
PF02786CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029055Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR050115FamilyProteasome subunit alphaInterproscan
IPR001353FamilyProteasome, subunit alpha/betaInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR006580DomainZinc finger, TTF-typeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR008737DomainPeptidase aspartic, putativeInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR005479DomainCarbamoyl-phosphate synthetase large subunit-like, ATP-binding domainInterproscan
IPR011761DomainATP-grasp foldInterproscan
IPR005483DomainCarbamoyl-phosphate synthase large subunit, CPSase domainInterproscan
IPR016185Homologous_superfamilyPre-ATP-grasp domain superfamilyInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11599PROTEASOME SUBUNIT ALPHA/BETAInterproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45749-Interproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR11405CARBAMOYLTRANSFERASE FAMILY MEMBERInterproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0010498Biological Processproteasomal protein catabolic processInterproscan
GO:0019773Cellular Componentproteasome core complex, alpha-subunit complexInterproscan
GO:0005839Cellular Componentproteasome core complexInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0006807Biological Processobsolete nitrogen compound metabolic processInterproscan
GO:0004070Molecular Functionaspartate carbamoyltransferase activityInterproscan
GO:0004088Molecular Functioncarbamoyl-phosphate synthase (glutamine-hydrolyzing) activityInterproscan
GO:0004151Molecular Functiondihydroorotase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006207Biological Process'de novo' pyrimidine nucleobase biosynthetic processInterproscan
GO:0006228Biological ProcessUTP biosynthetic processInterproscan
GO:0006541Biological Processglutamine metabolic processInterproscan
GO:0019240Biological Processcitrulline biosynthetic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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