Detailed information of Aala_g2560.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAJ7334340.1, ATP-dependent RNA helicase A [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q68FK8ATP-dependent RNA helicase A protein OS=Xenopus laevis OX=8355 GN=dhx9 PE=2 SV=1
O70133ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2
Q5R874ATP-dependent RNA helicase A OS=Pongo abelii OX=9601 GN=DHX9 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04408HA2_NHelicase associated domain (HA2), winged-helixDomainInterproscan
PF07717OB_NTP_bindOligonucleotide/oligosaccharide-binding (OB)-foldDomainInterproscan
PF01323DSBADSBA-like thioredoxin domainDomainInterproscan
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048333DomainHelicase associated domain (HA2), winged-helix domainInterproscan
IPR011709DomainDEAD-box helicase, OB foldInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007502DomainHelicase-associated domainInterproscan
IPR001853DomainDSBA-like thioredoxin domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan
PTHR35846PROTEIN CBG05131Interproscan
PTHR47326TRANSPOSABLE ELEMENT TC3 TRANSPOSASE-LIKE PROTEINInterproscan
PTHR34072ENZYMATIC POLYPROTEIN-RELATEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR37162HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0050684Biological Processregulation of mRNA processingInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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