Detailed information of Aala_g2566.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_031563904.1, neurogenic differentiation factor 6-B-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P46581Neurogenic differentiation factor 1 OS=Caenorhabditis elegans OX=6239 GN=cnd-1 PE=2 SV=1
P79766Neurogenic differentiation factor 4 OS=Gallus gallus OX=9031 GN=NEUROD4 PE=2 SV=1
Q9HD90Neurogenic differentiation factor 4 OS=Homo sapiens OX=9606 GN=NEUROD4 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR039808FamilyCadherinInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR050359FamilyBasic helix-loop-helix transcription factorsInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24027CADHERIN-23Interproscan
PTHR38681RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATEDInterproscan
PTHR19290BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0000902Biological Processcell morphogenesisInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0007043Biological Processcell-cell junction assemblyInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016339Biological Processcalcium-dependent cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0034332Biological Processadherens junction organizationInterproscan
GO:0044331Biological Processcell-cell adhesion mediated by cadherinInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0007423Biological Processsensory organ developmentInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0061564Biological Processaxon developmentInterproscan
GO:0070888Molecular FunctionE-box bindingInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

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