Detailed information of Aala_g2574.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_043208619.1, DNA topoisomerase 1-like isoform X2 [Amphibalanus amphitrite]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q07050DNA topoisomerase 1 OS=Cricetulus griseus OX=10029 GN=TOP1 PE=2 SV=1
Q04750DNA topoisomerase 1 OS=Mus musculus OX=10090 GN=Top1 PE=1 SV=2
Q9WUL0DNA topoisomerase 1 OS=Rattus norvegicus OX=10116 GN=Top1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520Ion_transIon transport proteinFamilyInterproscan
PF16905GPHHVoltage-dependent L-type calcium channel, IQ-associatedFamilyInterproscan
PF02919Topoisom_I_NEukaryotic DNA topoisomerase I, DNA binding fragmentFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026079FamilyCerebellar degeneration-related protein 2Interproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR005821DomainIon transport domainInterproscan
IPR031649DomainVoltage-dependent L-type calcium channel, IQ-associated domainInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR050599FamilyVoltage-dependent calcium channel alpha-1 subunitInterproscan
IPR038825FamilyApical junction componentInterproscan
IPR013030Homologous_superfamilyDNA topoisomerase I, DNA binding, N-terminal domain 2Interproscan
IPR036202Homologous_superfamilyDNA topoisomerase I, DNA binding, eukaryotic-type, N-terminal domain superfamilyInterproscan
IPR008336DomainDNA topoisomerase I, DNA binding, eukaryotic-typeInterproscan
IPR051062FamilyDNA topoisomerase IBInterproscan
IPR013034Homologous_superfamilyDNA topoisomerase I, DNA binding, N-terminal domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19232CENTROCORTIN FAMILY MEMBERInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR45628VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1Interproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR21517UNCHARACTERIZEDInterproscan
PTHR10290DNA TOPOISOMERASE IInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005891Cellular Componentvoltage-gated calcium channel complexInterproscan
GO:0008331Molecular Functionhigh voltage-gated calcium channel activityInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0043296Cellular Componentapical junction complexInterproscan
GO:0045216Biological Processcell-cell junction organizationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003917Molecular FunctionDNA topoisomerase type I (single strand cut, ATP-independent) activityInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0006265Biological ProcessDNA topological changeInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0007059Biological Processchromosome segregationInterproscan

TOP