Detailed information of Aala_g2576.t1 in Alatina alata

Genomic Location: :...
NR annotation: NWS77411.1, CAC1S protein [Crotophaga sulcirostris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P22316Dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1 OS=Cyprinus carpio OX=7962 PE=2 SV=1
O57483Voltage-dependent L-type calcium channel subunit alpha-1S OS=Aquarana catesbeiana OX=8400 PE=2 SV=1
Q01815Voltage-dependent L-type calcium channel subunit alpha-1C OS=Mus musculus OX=10090 GN=Cacna1c PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520Ion_transIon transport proteinFamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF13676TIR_2TIR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR050599FamilyVoltage-dependent calcium channel alpha-1 subunitInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR014010DomainREJ domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR050751FamilyExtracellular matrix structural proteinInterproscan
IPR035897Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR000157DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45628VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1Interproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR24034EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005891Cellular Componentvoltage-gated calcium channel complexInterproscan
GO:0008331Molecular Functionhigh voltage-gated calcium channel activityInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

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