Detailed information of Aala_g2578.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAF1103757.1, unnamed protein product [Didymodactylos carnosus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P00480Ornithine transcarbamylase, mitochondrial OS=Homo sapiens OX=9606 GN=OTC PE=1 SV=3
O19072Ornithine transcarbamylase, mitochondrial (Fragment) OS=Sus scrofa OX=9823 GN=OTC PE=2 SV=1
P11725Ornithine transcarbamylase, mitochondrial OS=Mus musculus OX=10090 GN=Otc PE=1 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00185OTCaceAspartate/ornithine carbamoyltransferase, Asp/Orn binding domainDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF02945Endonuclease_7Recombination endonuclease VIIDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036901Homologous_superfamilyAspartate/ornithine carbamoyltransferase superfamilyInterproscan
IPR006131DomainAspartate/ornithine carbamoyltransferase, Asp/Orn-binding domainInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR039739FamilyRING-finger protein MAG2/RNF10Interproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR004211FamilyRecombination endonuclease VIIInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR038563Homologous_superfamilyRecombination endonuclease VII superfamilyInterproscan
IPR044925Homologous_superfamilyHis-Me finger superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45753ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIALInterproscan
PTHR12983RING FINGER 10 FAMILY MEMBERInterproscan
PTHR31511PROTEIN CBG23764Interproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR45749-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0016597Molecular Functionamino acid bindingInterproscan
GO:0016743Molecular Functioncarboxyl- or carbamoyltransferase activityInterproscan
GO:0004585Molecular Functionornithine carbamoyltransferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0019240Biological Processcitrulline biosynthetic processInterproscan
GO:0042450Biological Processarginine biosynthetic process via ornithineInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09268SOX11_12; transcription factor SOX11/12 (SOX group C)-Transcription factorsko03000deepkoala

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