Gene detail

Detailed information of Aala_g2582.t1 in Alatina alata

Genomic Location: :...
NR annotation: GFS00728.1, endonuclease-reverse transcriptase [Elysia marginata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q62915	Peripheral plasma membrane protein CASK OS=Rattus norvegicus OX=10116 GN=Cask PE=1 SV=1
O14936	Peripheral plasma membrane protein CASK OS=Homo sapiens OX=9606 GN=CASK PE=1 SV=3
O70589	Peripheral plasma membrane protein CASK OS=Mus musculus OX=10090 GN=Cask PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	HTH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02009	RIFIN	Rifin	Family	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00075	RNase_H	RNase H	Domain	Interproscan
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF05225	HTH_psq	helix-turn-helix, Psq domain	Domain	Interproscan
PF01070	FMN_dh	FMN-dependent dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006373	Family	Variant surface antigen Rifin	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR002156	Domain	Ribonuclease H domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR007889	Domain	DNA binding HTH domain, Psq-type	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR008259	Active_site	FMN-dependent alpha-hydroxy acid dehydrogenase, active site	Interproscan
IPR037396	Domain	FMN hydroxy acid dehydrogenase domain	Interproscan
IPR000262	Domain	FMN-dependent dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR24347	SERINE/THREONINE-PROTEIN KINASE	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR10578	S -2-HYDROXY-ACID OXIDASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan