Gene detail

Detailed information of Aala_g2606.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_004206245.1, myosin light chain 6B [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P17209	Myosin light chain 4 OS=Rattus norvegicus OX=10116 GN=Myl4 PE=2 SV=2
P09541	Myosin light chain 4 OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=3
P53014	Myosin, essential light chain OS=Caenorhabditis elegans OX=6239 GN=mlc-3 PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF12251	SNAPC3	snRNA-activating protein complex (SNAPc), subunit 3	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR050230	Family	Calcium-Regulated Muscle Contraction and Cellular Process	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR004244	Family	Transposase, L1	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR022042	Family	snRNA-activating protein complex, subunit 3	Interproscan
IPR050401	Family	Cyclic nucleotide synthase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR23048	MYOSIN LIGHT CHAIN 1, 3	Interproscan
PTHR23507	ZGC:174356	Interproscan
PTHR11505	L1 TRANSPOSABLE ELEMENT-RELATED	Interproscan
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan
PTHR13421	SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3	Interproscan
PTHR11920	GUANYLYL CYCLASE	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR46601	ULP_PROTEASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0016460	Cellular Component	myosin II complex	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0003727	Molecular Function	single-stranded RNA binding	Interproscan
GO:0032197	Biological Process	retrotransposition	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0001006	Molecular Function	RNA polymerase III type 3 promoter sequence-specific DNA binding	Interproscan
GO:0001046	Molecular Function	core promoter sequence-specific DNA binding	Interproscan
GO:0003681	Molecular Function	bent DNA binding	Interproscan
GO:0019185	Cellular Component	snRNA-activating protein complex	Interproscan
GO:0042795	Biological Process	snRNA transcription by RNA polymerase II	Interproscan
GO:0042796	Biological Process	snRNA transcription by RNA polymerase III	Interproscan
GO:0001653	Molecular Function	peptide receptor activity	Interproscan
GO:0004016	Molecular Function	adenylate cyclase activity	Interproscan
GO:0004383	Molecular Function	guanylate cyclase activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006182	Biological Process	cGMP biosynthetic process	Interproscan
GO:0007168	Biological Process	receptor guanylyl cyclase signaling pathway	Interproscan