Detailed information of Aala_g2609.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAH1202940.1, LINE-1 retrotransposable element ORF2 protein [Glycine max]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q708S4Acid-sensing ion channel 4-A OS=Danio rerio OX=7955 GN=asic4a PE=1 SV=1
H2QAR5Epithelial sodium channel subunit gamma OS=Pan troglodytes OX=9598 GN=SCNN1G PE=3 SV=1
Q9UHC3Acid-sensing ion channel 3 OS=Homo sapiens OX=9606 GN=ASIC3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF03045DANDAN domainDomainInterproscan
PF00858ASCAmiloride-sensitive sodium channelFamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR029034Homologous_superfamilyCystine-knot cytokineInterproscan
IPR006207DomainCystine knot, C-terminalInterproscan
IPR004133DomainDANInterproscan
IPR014010DomainREJ domainInterproscan
IPR036514Homologous_superfamilySGNH hydrolase superfamilyInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR001873FamilyEpithelial sodium channelInterproscan
IPR051637FamilyAnkyrin repeat domain-containing protein 49Interproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR11690AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATEDInterproscan
PTHR24180CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005272Molecular Functionsodium channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0015280Molecular Functionligand-gated sodium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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