Detailed information of Aala_g2616.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG1680488.1, Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial [Nymphon striatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6DRC0Serine--tRNA ligase, cytoplasmic OS=Danio rerio OX=7955 GN=sars1 PE=1 SV=1
Q9GMB8Serine--tRNA ligase, cytoplasmic OS=Bos taurus OX=9913 GN=SARS1 PE=2 SV=3
P26636Serine--tRNA ligase, cytoplasmic OS=Cricetulus griseus OX=10029 GN=SARS1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF00135COesteraseCarboxylesterase familyDomainInterproscan
PF06747CHCHCHCH domainDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR002156DomainRibonuclease H domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050173FamilyATP-binding cassette transporter CInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR019826Active_siteCarboxylesterase type B, active siteInterproscan
IPR050309FamilyType-B Carboxylesterase/LipaseInterproscan
IPR002018DomainCarboxylesterase, type BInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR010625DomainCHCHInterproscan
IPR039289FamilyMitochondrial intermembrane space import and assembly protein 40Interproscan
IPR002317FamilySerine-tRNA ligase, type1Interproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR24223ATP-BINDING CASSETTE SUB-FAMILY CInterproscan
PTHR11559CARBOXYLESTERASEInterproscan
PTHR21622COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4Interproscan
PTHR11778SERYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0042626Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005758Cellular Componentmitochondrial intermembrane spaceInterproscan
GO:0015035Molecular Functionprotein-disulfide reductase activityInterproscan
GO:0022417Biological Processprotein maturation by protein foldingInterproscan
GO:0045041Biological Processprotein import into mitochondrial intermembrane spaceInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004828Molecular Functionserine-tRNA ligase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006434Biological Processseryl-tRNA aminoacylationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17782MIA40, CHCHD4; mitochondrial intermembrane space import and assembly protein 40-Transportersko02000deepkoala

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