Detailed information of Aala_g2620.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_027212303.1, uncharacterized protein LOC113805499 [Penaeus vannamei]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q17103Myc protein (Fragment) OS=Asterias rubens OX=7604 GN=MYC PE=2 SV=1
P49032Myc proto-oncogene protein OS=Callithrix jacchus OX=9483 GN=MYC PE=3 SV=1
P22555Myc proto-oncogene protein OS=Marmota monax OX=9995 GN=MYC PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF01056Myc_NMyc amino-terminal regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR002418FamilyTranscription regulator MycInterproscan
IPR050433FamilyMyc family transcription factorsInterproscan
IPR012682DomainTranscription regulator Myc, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR45851MYC PROTO-ONCOGENEInterproscan
PTHR16146INTELECTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0070492Molecular Functionoligosaccharide bindingInterproscan

TOP