Detailed information of Aala_g2626.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI0210793.1, Katanin p80 WD40 repeat-containing subunit B1 [Lamellibrachia satsuma]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8N2C7Protein unc-80 homolog OS=Homo sapiens OX=9606 GN=UNC80 PE=1 SV=2
Q8BLN6Protein unc-80 homolog OS=Mus musculus OX=10090 GN=Unc80 PE=1 SV=3
Q9Y4A5Transformation/transcription domain-associated protein OS=Homo sapiens OX=9606 GN=TRRAP PE=1 SV=3
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan
PF20175Tra1_centralTra1 HEAT repeat central regionRepeatInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF19424UNC80Protein UNC80 central regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR051000FamilyHomeobox DNA-bindingInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR046807RepeatTra1, HEAT repeat central regionInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR052247FamilyMeiotic Crossover HelicaseInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR050972FamilySerine-aspartate repeat-containing proteinInterproscan
IPR045852DomainProtein UNC80, central regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24324HOMEOBOX PROTEIN HHEXInterproscan
PTHR35846PROTEIN CBG05131Interproscan
PTHR47272DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR47835HFM1, ATP DEPENDENT DNA HELICASE HOMOLOGInterproscan
PTHR34403TOL-PAL SYSTEM PROTEIN TOLAInterproscan
PTHR31781UNC80Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0034703Cellular Componentcation channel complexInterproscan
GO:0055080Biological Processmonoatomic cation homeostasisInterproscan

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