Gene detail

Detailed information of Aala_g2627.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAF3841488.1, hypothetical protein F7725_007350 [Dissostichus mawsoni]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q588U8	Craniofacial development protein 2 OS=Tragulus javanicus OX=9849 GN=CFDP2 PE=2 SV=1
O02751	Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
Q32L59	Transmembrane and coiled-coil domain-containing protein 5B OS=Bos taurus OX=9913 GN=TMCO5B PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00046	Homeodomain	Homeodomain	Domain	Interproscan
PF00135	COesterase	Carboxylesterase family	Domain	Interproscan
PF01608	I_LWEQ	I/LWEQ domain	Family	Interproscan
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR019826	Active_site	Carboxylesterase type B, active site	Interproscan
IPR050309	Family	Type-B Carboxylesterase/Lipase	Interproscan
IPR002018	Domain	Carboxylesterase, type B	Interproscan
IPR035964	Homologous_superfamily	I/LWEQ domain superfamily	Interproscan
IPR002558	Domain	I/LWEQ domain	Interproscan
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

Gene Ontology

GO terms	Category	Description	Source
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0005178	Molecular Function	integrin binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0005925	Cellular Component	focal adhesion	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan