Detailed information of Aala_g2628.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_032232313.1, class E basic helix-loop-helix protein 22 isoform X2 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P46581Neurogenic differentiation factor 1 OS=Caenorhabditis elegans OX=6239 GN=cnd-1 PE=2 SV=1
P79766Neurogenic differentiation factor 4 OS=Gallus gallus OX=9031 GN=NEUROD4 PE=2 SV=1
Q9HD90Neurogenic differentiation factor 4 OS=Homo sapiens OX=9606 GN=NEUROD4 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03348SerincSerine incorporator (Serinc)FamilyInterproscan
PF00135COesteraseCarboxylesterase familyDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026983FamilyDynein heavy chainInterproscan
IPR005016FamilySerine incorporator/TMS membrane proteinInterproscan
IPR002018DomainCarboxylesterase, type BInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR019826Active_siteCarboxylesterase type B, active siteInterproscan
IPR050309FamilyType-B Carboxylesterase/LipaseInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR050359FamilyBasic helix-loop-helix transcription factorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46961DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEINInterproscan
PTHR10383SERINE INCORPORATORInterproscan
PTHR11559CARBOXYLESTERASEInterproscan
PTHR11697GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEINInterproscan
PTHR19290BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0007423Biological Processsensory organ developmentInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0061564Biological Processaxon developmentInterproscan
GO:0070888Molecular FunctionE-box bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13528MED20; mediator of RNA polymerase II transcription subunit 20-Membrane traffickingko04131deepkoala
Transcription machineryko03021deepkoala

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