Gene detail

Detailed information of Aala_g2633.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_009023975.1, hypothetical protein HELRODRAFT_177552 [Helobdella robusta]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P10978	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
Q12337	Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-GR1 PE=5 SV=2
P0C2J5	Transposon Ty2-LR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-LR2 PE=5 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13976	gag_pre-integrs	GAG-pre-integrase domain	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan
IPR025724	Domain	GAG-pre-integrase domain	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR014010	Domain	REJ domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46114	APPLE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR47266	ENDONUCLEASE-RELATED	Interproscan
PTHR42648	TRANSPOSASE, PUTATIVE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01464	DPYS, dht, hydA; dihydropyrimidinase	EC:3.5.2.2	Exosome	ko04147	deepkoala