Gene detail

Detailed information of Aala_g2640.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_009956865.1, PREDICTED: RNA-binding protein NOB1, partial [Leptosomus discolor]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q3T042	RNA-binding protein NOB1 OS=Bos taurus OX=9913 GN=NOB1 PE=2 SV=1
Q8BW10	RNA-binding protein NOB1 OS=Mus musculus OX=10090 GN=Nob1 PE=1 SV=1
Q4R537	RNA-binding protein NOB1 OS=Macaca fascicularis OX=9541 GN=NOB1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan
PF07727	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR013103	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR039907	Family	RNA-binding protein NOB1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR37162	HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED	Interproscan
PTHR42648	TRANSPOSASE, PUTATIVE-RELATED	Interproscan
PTHR12814	RNA-BINDING PROTEIN NOB1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0004521	Molecular Function	RNA endonuclease activity	Interproscan
GO:0030490	Biological Process	maturation of SSU-rRNA	Interproscan
GO:0030688	Cellular Component	preribosome, small subunit precursor	Interproscan