Detailed information of Aala_g2661.t1 in Alatina alata

Genomic Location: :...
NR annotation: RXN27298.1, hypothetical protein ROHU_020177 [Labeo rohita]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P04146Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
P92519Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17677Glyco_hydro38C2Glycosyl hydrolases family 38 C-terminal beta sandwich domainDomainInterproscan
PF07748Glyco_hydro_38CGlycosyl hydrolases family 38 C-terminal domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR014010DomainREJ domainInterproscan
IPR041147DomainGlycosyl hydrolases family 38, C-terminal beta sandwich domainInterproscan
IPR011013Homologous_superfamilyGalactose mutarotase-like domain superfamilyInterproscan
IPR011682DomainGlycosyl hydrolase family 38, C-terminalInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR46017ALPHA-MANNOSIDASE 2C1Interproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004559Molecular Functionalpha-mannosidase activityInterproscan
GO:0009313Biological Processoligosaccharide catabolic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0006013Biological Processmannose metabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25722PRG3; proteoglycan 3-Signaling proteins-deepkoala

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