Gene detail

Detailed information of Aala_g2666.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_042880532.1, uncharacterized protein LOC122258583 [Penaeus japonicus]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q96HW7	Integrator complex subunit 4 OS=Homo sapiens OX=9606 GN=INTS4 PE=1 SV=2
Q8CIM8	Integrator complex subunit 4 OS=Mus musculus OX=10090 GN=Ints4 PE=1 SV=1
Q68F70	Integrator complex subunit 4 OS=Xenopus laevis OX=8355 GN=ints4 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07727	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan
PF02985	HEAT	HEAT repeat	Repeat	Interproscan
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan
PF12777	MT	Microtubule-binding stalk of dynein motor	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040059	Family	Pumilio homologue 3	Interproscan
IPR013103	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR052510	Family	Oomycete RxLR Effector	Interproscan
IPR000357	Repeat	HEAT repeat	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR052958	Family	Interferon-induced PKR regulator	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR026983	Family	Dynein heavy chain	Interproscan
IPR024743	Domain	Dynein heavy chain, coiled coil stalk	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR051860	Family	Plasmodium Circumsporozoite Invasion Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13389	UNCHARACTERIZED	Interproscan
PTHR45895	INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR20938	UNCHARACTERIZED	Interproscan
PTHR46289	52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED	Interproscan
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR45703	DYNEIN HEAVY CHAIN	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR44826	SPORE COAT PROTEIN SP85	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0006417	Biological Process	regulation of translation	Interproscan
GO:0016180	Biological Process	snRNA processing	Interproscan
GO:0032039	Cellular Component	integrator complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0030286	Cellular Component	dynein complex	Interproscan
GO:0045505	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19151	ibsC; small toxic protein IbsC	-	Prokaryotic defense system	ko02048	deepkoala