Detailed information of Aala_g2671.t1 in Alatina alata

Genomic Location: :...
NR annotation: ACN93675.1, myosin-like antigen, partial [Carukia barnesi]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3TUF7YEATS domain-containing protein 2 OS=Mus musculus OX=10090 GN=Yeats2 PE=1 SV=2
Q9ULM3YEATS domain-containing protein 2 OS=Homo sapiens OX=9606 GN=YEATS2 PE=1 SV=2
O95619YEATS domain-containing protein 4 OS=Homo sapiens OX=9606 GN=YEATS4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF03366YEATSYEATS familyDomainInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF00839Cys_rich_FGFRCysteine rich repeatFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR005033FamilyYEATSInterproscan
IPR038704Homologous_superfamilyYEATS superfamilyInterproscan
IPR011001Homologous_superfamilySaposin-likeInterproscan
IPR008139DomainSaposin B type domainInterproscan
IPR039770FamilyRibosome biogenesis protein Rpf2Interproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR049680FamilySolute carrier family 49-likeInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR039728FamilyGolgi apparatus protein 1Interproscan
IPR001893RepeatCysteine-rich Golgi apparatus protein 1 repeatInterproscan
IPR036070Homologous_superfamilyNop domain superfamilyInterproscan
IPR045056FamilyNucleolar protein Nop56/Nop58Interproscan
IPR002687DomainNop domainInterproscan
IPR042239Homologous_superfamilyNop, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33064POL PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR23195YEATS DOMAINInterproscan
PTHR12728BRIX DOMAIN CONTAINING PROTEINInterproscan
PTHR23159CENTROSOMAL PROTEIN 2Interproscan
PTHR10924MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATEDInterproscan
PTHR11884SELECTIN LIGAND RELATEDInterproscan
PTHR10894NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016573Biological Processobsolete histone acetylationInterproscan
GO:0035267Cellular ComponentNuA4 histone acetyltransferase complexInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0140672Cellular ComponentATAC complexInterproscan
GO:0000027Biological Processribosomal large subunit assemblyInterproscan
GO:0000463Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000470Biological Processmaturation of LSU-rRNAInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0015232Molecular Functionheme transmembrane transporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0051184Molecular Functionobsolete cofactor transmembrane transporter activityInterproscan
GO:0097037Biological Processheme exportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0030515Molecular FunctionsnoRNA bindingInterproscan
GO:0031428Cellular Componentbox C/D methylation guide snoRNP complexInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08220FLVCR, SLC49A1_2; MFS transporter, FLVCR family, feline leukemia virus subgroup C receptor-related protein-Cilium and associated proteinsko03037deepkoala
Transportersko02000deepkoala

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