Gene detail

Detailed information of Aala_g2678.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_044176649.1, uncharacterized protein LOC114975204 [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P04323	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P15629	Enzymatic polyprotein OS=Soybean chlorotic mottle virus OX=10651 GN=ORF V PE=3 SV=2
P0CF97	Protein FAM200B OS=Homo sapiens OX=9606 GN=FAM200B PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00665	rve	Integrase core domain	Domain	Interproscan
PF13650	Asp_protease_2	Aspartyl protease	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR001995	Domain	Peptidase A2A, retrovirus, catalytic	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR027124	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37162	HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR23227	BUCENTAUR RELATED	Interproscan
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11905	K11905; type VI secretion system protein	-	Secretion system	ko02044	deepkoala