Detailed information of Aala_g2679.t1 in Alatina alata

Genomic Location: :...
NR annotation: KXJ26093.1, Extended synaptotagmin-3 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6NYA0Serine/arginine-rich splicing factor 1B OS=Danio rerio OX=7955 GN=srsf1b PE=2 SV=1
Q0VCY7Serine/arginine-rich splicing factor 1 OS=Bos taurus OX=9913 GN=SRSF1 PE=2 SV=1
Q07955Serine/arginine-rich splicing factor 1 OS=Homo sapiens OX=9606 GN=SRSF1 PE=1 SV=2
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF08840BAAT_CBAAT / Acyl-CoA thioester hydrolase C terminalDomainInterproscan
PF17047SMP_LBDSynaptotagmin-like mitochondrial-lipid-binding domainDomainInterproscan
PF05960DUF885Bacterial protein of unknown function (DUF885)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR050374FamilyRRT5/SRSF/Splicing Factor SRInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR014940DomainBAAT/Acyl-CoA thioester hydrolase C-terminalInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR051634FamilyExtended SynaptotagminInterproscan
IPR039010DomainSynaptotagmin, SMP domainInterproscan
IPR010281FamilyProtein of unknown function DUF885Interproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35317OS04G0629600 PROTEINInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINInterproscan
PTHR10824ACYL-COENZYME A THIOESTERASE-RELATEDInterproscan
PTHR45761EXTENDED SYNAPTOTAGMIN-LIKE PROTEIN 2, ISOFORM CInterproscan
PTHR33361GLR0591 PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006631Biological Processfatty acid metabolic processInterproscan
GO:0006637Biological Processacyl-CoA metabolic processInterproscan
GO:0047617Molecular Functionfatty acyl-CoA hydrolase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005544Molecular Functioncalcium-dependent phospholipid bindingInterproscan
GO:0008429Molecular Functionphosphatidylethanolamine bindingInterproscan
GO:0031210Molecular Functionphosphatidylcholine bindingInterproscan
GO:0031227Cellular Componentobsolete intrinsic component of endoplasmic reticulum membraneInterproscan
GO:0031234Cellular Componentextrinsic component of cytoplasmic side of plasma membraneInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan

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