Detailed information of Aala_g2705.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_020612219.1, uncharacterized protein LOC110050643, partial [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P41340Actin-3 OS=Limulus polyphemus OX=6850 PE=1 SV=1
P92182Actin-1 OS=Lumbricus terrestris OX=6398 GN=ACT1 PE=2 SV=1
P79818Actin, cytoplasmic 1 OS=Oryzias latipes OX=8090 GN=actb PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00022ActinActinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043129Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR004000FamilyActin familyInterproscan
IPR020902Conserved_siteActin/actin-like conserved siteInterproscan
IPR004001Conserved_siteActin, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45749-Interproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR11937ACTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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