Detailed information of Aala_g2709.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_002161661.3, uncharacterized protein LOC100203938 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q61315Adenomatous polyposis coli protein OS=Mus musculus OX=10090 GN=Apc PE=1 SV=1
P25054Adenomatous polyposis coli protein OS=Homo sapiens OX=9606 GN=APC PE=1 SV=2
P70478Adenomatous polyposis coli protein OS=Rattus norvegicus OX=10116 GN=Apc PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF18797APC_repAdenomatous polyposis coli (APC) repeatRepeatInterproscan
PF00514ArmArmadillo/beta-catenin-like repeatRepeatInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR041257RepeatAdenomatous polyposis coli (APC) repeatInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR000225RepeatArmadilloInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR026818FamilyAdenomatous polyposis coli (APC) familyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR12607ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILYInterproscan
PTHR38681RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001708Biological Processcell fate specificationInterproscan
GO:0005881Cellular Componentcytoplasmic microtubuleInterproscan
GO:0007026Biological Processnegative regulation of microtubule depolymerizationInterproscan
GO:0007389Biological Processpattern specification processInterproscan
GO:0007399Biological Processnervous system developmentInterproscan
GO:0008013Molecular Functionbeta-catenin bindingInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0030178Biological Processnegative regulation of Wnt signaling pathwayInterproscan
GO:0030877Cellular Componentbeta-catenin destruction complexInterproscan
GO:0045295Molecular Functiongamma-catenin bindingInterproscan
GO:0045595Biological Processregulation of cell differentiationInterproscan
GO:0045732Biological Processpositive regulation of protein catabolic processInterproscan
GO:0090090Biological Processnegative regulation of canonical Wnt signaling pathwayInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04749rsbV; anti-sigma B factor antagonist-Transcription machineryko03021deepkoala

TOP