Gene detail

Detailed information of Aala_g2713.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_047130415.1, vacuolar protein sorting-associated protein 13D isoform X2 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5THJ4	Intermembrane lipid transfer protein VPS13D OS=Homo sapiens OX=9606 GN=VPS13D PE=1 SV=2
Q9VU08	Intermembrane lipid transfer protein Vps13D OS=Drosophila melanogaster OX=7227 GN=Vps13D PE=1 SV=3
P21328	RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13330	Mucin2_WxxW	Mucin-2 protein WxxW repeating region	Family	Interproscan
PF03098	An_peroxidase	Animal haem peroxidase	Domain	Interproscan
PF00075	RNase_H	RNase H	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010255	Homologous_superfamily	Haem peroxidase superfamily	Interproscan
IPR037120	Homologous_superfamily	Haem peroxidase domain superfamily, animal type	Interproscan
IPR019791	Family	Haem peroxidase, animal-type	Interproscan
IPR025155	Domain	WxxW domain	Interproscan
IPR050702	Family	Peroxidase Activity and Reactive Species Generation	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR052560	Family	RNA-directed DNA polymerase, mobile element	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR002156	Domain	Ribonuclease H domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR026847	Family	Vacuolar protein sorting-associated protein 13	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11475	OXIDASE/PEROXIDASE	Interproscan
PTHR36688	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR16166	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004601	Molecular Function	peroxidase activity	Interproscan
GO:0006979	Biological Process	response to oxidative stress	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0006623	Biological Process	protein targeting to vacuole	Interproscan
GO:0007005	Biological Process	mitochondrion organization	Interproscan
GO:0019898	Cellular Component	extrinsic component of membrane	Interproscan
GO:0045053	Biological Process	protein retention in Golgi apparatus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19511	PXDN, VPO1; peroxidase	EC:1.11.1.7	Enzymes with EC numbers	-	deepkoala