Detailed information of Aala_g2719.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_027038195.1, double-strand-break repair protein rad21 homolog [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3SWX9Double-strand-break repair protein rad21 homolog OS=Bos taurus OX=9913 GN=RAD21 PE=2 SV=1
O60216Double-strand-break repair protein rad21 homolog OS=Homo sapiens OX=9606 GN=RAD21 PE=1 SV=2
O93310Double-strand-break repair protein rad21 homolog OS=Xenopus laevis OX=8355 GN=rad21 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04824Rad21_Rec8Conserved region of Rad21 / Rec8 like proteinFamilyInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR006909DomainRad21/Rec8-like protein, C-terminal, eukaryoticInterproscan
IPR039781FamilyRad21/Rec8-like proteinInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR049589DomainNXP-1, middle HEAT-repeat binding domainInterproscan
IPR023093Homologous_superfamilyScpA-like, C-terminalInterproscan
IPR000358FamilyRibonucleotide reductase small subunit familyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR12585SCC1 / RAD21 FAMILY MEMBERInterproscan
PTHR23409RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0007062Biological Processsister chromatid cohesionInterproscan
GO:0008278Cellular Componentcohesin complexInterproscan
GO:1990414Biological Processreplication-born double-strand break repair via sister chromatid exchangeInterproscan
GO:0004748Molecular Functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptorInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0009263Biological Processdeoxyribonucleotide biosynthetic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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