Detailed information of Aala_g28.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG2458394.1, GTD2B protein, partial [Polypterus senegalus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q80UJ9Histone-lysine N-methyltransferase SETMAR OS=Mus musculus OX=10090 GN=Setmar PE=2 SV=2
Q5I0M0Histone-lysine N-methyltransferase SETMAR OS=Rattus norvegicus OX=10116 GN=Setmar PE=2 SV=1
Q0VD24Histone-lysine N-methyltransferase SETMAR OS=Bos taurus OX=9913 GN=SETMAR PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyETS

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF20256MoCoBD_2Molybdopterin cofactor-binding domainDomainInterproscan
PF13087AAA_12AAA domainDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF00178EtsEts-domainDomainInterproscan
PF05033Pre-SETPre-SET motifFamilyInterproscan
PF00856SETSET domainFamilyInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF04218CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR046867DomainAldehyde oxidase/xanthine dehydrogenase, second molybdopterin binding domainInterproscan
IPR037165Homologous_superfamilyAldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamilyInterproscan
IPR016208FamilyAldehyde oxidase/xanthine dehydrogenase-likeInterproscan
IPR002052Conserved_siteDNA methylase, N-6 adenine-specific, conserved siteInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR039775FamilyHomeodomain containing protein PHTF1/2Interproscan
IPR045055FamilyDNA2/NAM7-like helicaseInterproscan
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR046328FamilyETS familyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR000418DomainEts domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR007728DomainPre-SET domainInterproscan
IPR001214DomainSET domainInterproscan
IPR003616DomainPost-SET domainInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR050973FamilyHistone-lysine N-methyltransferase, H3 Lys-9 specificInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR11908XANTHINE DEHYDROGENASEInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR12680PUTATIVE HOMEODOMAIN TRANSCRIPTION FACTOR PHTFInterproscan
PTHR10887DNA2/NAM7 HELICASE FAMILYInterproscan
PTHR47272DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR11849ETSInterproscan
PTHR46223HISTONE-LYSINE N-METHYLTRANSFERASE SUV39HInterproscan
PTHR19303TRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0032259Biological ProcessmethylationInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0035194Biological Processregulatory ncRNA-mediated post-transcriptional gene silencingInterproscan
GO:0043186Cellular ComponentP granuleInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0042054Molecular Functionhistone methyltransferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

TOP